BDgene

Gene Report

Basic Info
Approved Symbol GABRA6
Approved Name gamma-aminobutyric acid (GABA) A receptor, alpha 6
Name Alias GABA(A) receptor, alpha 6
Location 5q34
Position chr5:161547063-161702593, 1
External Links HGNC: 4080
Entrez Gene: 2559
Ensembl: ENSG00000145863
UCSC: uc003lyu.2
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? YES
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Yosifova, A.,2011 SNP: rs10476364 No significant association of this gene was observed in BD. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 16)

GO terms by PBA (count: 6)

GO terms by database search (count: 10)


Gene related KEGG pathways (count: 1)

KEGG pathways by PBA (count: 0)

KEGG pathways by database search (count: 1)


Gene related BioCarta pathways (count: 2)

BioCarta pathways by PBA (count: 2)

BioCarta pathways by database search (count: 0)


Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 2)

Literature-origin SNPs (count: 2)

LD-proxies (count: 0)


Gene related CNVs (count: 1)

Gene related other variants (count: 0)

Gene related regions (count: 2)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with SZ from candidate gene intersection analysis (count: 2)


Gene relationship with MDD

View in gBrowse

Region: chr5:161547063..161702593 View in gBrowse
View in gBrowse