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SNP Report
Name | rs8647 dbSNP Ensembl | ||
---|---|---|---|
Location | chr19:49933723 - 49933723(1) | ||
Variant Alleles | G/A | ||
Ancestral Allele | G | ||
Minor Allele | A | ||
Minor Allele Frequence | 0.282548 | ||
Functional Annotation | 3_prime_UTR_variant; downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant. | ||
Consequence to Transcript | 3_prime_UTR_variant(ENST00000423777); downstream_gene_variant(ENST00000578027, ENST00000595125, ENST00000596658, ENST00000597227, ENST00000600336); intron_variant(ENST00000451973); NMD_transcript_variant(ENST00000451973); upstream_gene_variant(ENST00000341114, ENST00000352066, ENST00000422090, ENST00000593652, ENST00000594673, ENST00000595463, ENST00000595948, ENST00000596011, ENST00000596022, ENST00000596217, ENST00000596437, ENST00000596680, ENST00000597029, ENST00000597295, ENST00000597723, ENST00000597814, ENST00000598301, ENST00000599186, ENST00000599560, ENST00000599567, ENST00000599788, ENST00000599830, ENST00000600583, ENST00000600935, ENST00000601665, ENST00000601717) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | NO | ||
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.