SNP Report

Basic Info

Name	rs3170545 dbSNP Ensembl
Location	chr19:49933458 - 49933458(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.283746
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000423777); downstream_gene_variant(ENST00000578027, ENST00000595125, ENST00000596658, ENST00000597227, ENST00000600336); intron_variant(ENST00000451973); NMD_transcript_variant(ENST00000451973); upstream_gene_variant(ENST00000341114, ENST00000352066, ENST00000422090, ENST00000593652, ENST00000594673, ENST00000595463, ENST00000595948, ENST00000596011, ENST00000596022, ENST00000596217, ENST00000596437, ENST00000596680, ENST00000597029, ENST00000597295, ENST00000597723, ENST00000597814, ENST00000598301, ENST00000599186, ENST00000599560, ENST00000599567, ENST00000599788, ENST00000599830, ENST00000600583, ENST00000600935, ENST00000601665, ENST00000601717)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
IL4I1	interleukin 4 induced 1	19q13.3-q13.4	Mapped by Literature SNP
NUP62	nucleoporin 62kDa	19q13.33	Mapped by Literature SNP
ATF5	activating transcription factor 5	19q13.33	1(0/1/0)

SNPs in LD with rs3170545 (count: 0) View in gBrowse (chr19:49933458..49933458 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)