SNP Report

Basic Info

Name	rs6986303 dbSNP Ensembl
Location	chr8:133466286 - 133466286(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.43111
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000399640, ENST00000517668, ENST00000521180, ENST00000522204, ENST00000522652, ENST00000523854); non_coding_transcript_variant(ENST00000522204)
No. of Studies	2 (Positive: 1; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Zandi, P. P., 2008 (b)	G/A	A	FBAT allelic P-value = 2.82E-04 ; Geno-PDT genotypic P-valu...... FBAT allelic P-value = 2.82E-04 ; Geno-PDT genotypic P-value = 6.60E-03 More...	None of the SNPs were associated with BP in the single-locus...... None of the SNPs were associated with BP in the single-locus tests at a level that exceeded our threshold for study-wide significance (P<3.00E-05). More...	Positive
Zhang, P.,2010			Association analysis: FBAT P-value = 0.0011 Association analysis: FBAT P-value = 0.0011	Suggestive association was found. Suggestive association was found.	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ST3GAL1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	8q24.22	4(3/0/1)

SNPs in LD with rs6986303 (count: 0) View in gBrowse (chr8:133466286..133466286 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)