BDgene

SNP Report

Basic Info
Name rs4900525 dbSNP Ensembl
Location chr14:101938404 - 101938404(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.44389
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Gonzalez, S., 2014 Test for linkage: LOD=1.24, P-value=0.127; Test for assoc...... Test for linkage: LOD=1.24, P-value=0.127; Test for association: LOD=0.67, P-value=0.078; Test for other linked variants: LOD=1.59, P-value=0.026 More... No significant associations were observed. No significant associations were observed. Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma 14q32.31 1(0/1/0)
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 14q32.31 1(0/1/0)

SNPs in LD with rs4900525 (count: 0) View in gBrowse (chr14:101938404..101938404 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)