SNP Report

Basic Info

Name	rs11146020 dbSNP Ensembl
Location	chr9:137138632 - 137138632(1)
Variant Alleles	G/C
Ancestral Allele	G
Minor Allele	C
Minor Allele Frequence	0.107029
Functional Annotation	5_prime_UTR_variant; upstream_gene_variant.
Consequence to Transcript	5_prime_UTR_variant(ENST00000371561); upstream_gene_variant(ENST00000350902, ENST00000371546, ENST00000371550, ENST00000371553, ENST00000371555, ENST00000371559, ENST00000371560, ENST00000471122)
No. of Studies	2 (Positive: 1; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Yosifova, A.,2009	G/C		Allelic association: 1st screening: P-value = 0.068, 2nd scr...... Allelic association: 1st screening: P-value = 0.068, 2nd screening: P-value = 0.65, total: P-value = 0.082 More...	Significant association was observed Significant association was observed	Positive
Georgi, A., 2006	G/C		data not shown data not shown	Allele and haplotype frequencies did not differ between case...... Allele and haplotype frequencies did not differ between cases and controls. More...	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GRIN1	glutamate receptor, ionotropic, N-methyl D-aspartate 1	9q34.3	3(2/1/0)

SNPs in LD with rs11146020 (count: 0) View in gBrowse (chr9:137138632..137138632 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)