BDgene

Core Gene from Gene Prioritization Pathways from PBA (Pathway-based Analysis) Enriched Pathways for Core Genes Enriched Pathways for Cross-disorder Genes

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Region Report

Basic Info

Region Name	20p12
Chromosome Position	chr20:5100000-17900000
No. of Studies (Positive/Negative/Trend)	4(0/0/4)

Region related studies (count: 4)

Reference	Markers	Statistical Values	Author Comments	Result Category
Cassidy, F.,2007	D20S602	Pairwise Linkage Analysis: narrow model, NPL = 2.11314, P-va...... Pairwise Linkage Analysis: narrow model, NPL = 2.11314, P-value = 0.016765; Structure-Guided Linkage Analysis: Broad model: NPL = 0.6, P-value = 0.27 for all families.; NPL = 0.65, P-value = 0.25 for families.; Narrow model: NPL = 2.14, P-value = 0.016 for all families.; NPL = 2.11, P_value = 0.016 for 60% homogeneous families. More...	There is a trend for Significant linkage. There is a trend for Significant linkage.	Trend
Willour, V. L.,2003	D20S162	liknage analysis: LOD = 2.38 for combined pedigree sets liknage analysis: LOD = 2.38 for combined pedigree sets	Suggestive linkage was found in this region. Suggestive linkage was found in this region.	Trend
McInnis, M. G.,2003(a)	D20S162	Linkage analysis: model E, Conditional NPL = 2.6, P-value = ...... Linkage analysis: model E, Conditional NPL = 2.6, P-value = 0.008 More...	Suggestive linkage was found in this region. Suggestive linkage was found in this region.	Trend
Goes, F. S.,2007	d20s162	Linkage analyses: LOD = 3.23 for Broad Model Bipolar Phenoty...... Linkage analyses: LOD = 3.23 for Broad Model Bipolar Phenotype (Schizoaffective Disorder, Bipolar Type; Bipolar I and II Disorder, Major Depressive Disorder, Recurrent) More...	There is a trend for Significant linkage. There is a trend for Significant linkage.	Trend

Region related genes (count: 4)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SNAP25	synaptosomal-associated protein, 25kDa	20p12-p11.2	2(2/0/0)
SEL1L2	sel-1 suppressor of lin-12-like 2 (C. elegans)	20p12.1	1(0/1/0)
PROKR2	prokineticin receptor 2	20p12.3	1(1/0/0)
MACROD2	MACRO domain containing 2	20p12.1	2(0/1/1)

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Region: chr20:5100000..17900000 View in gBrowse