Gene Report

Basic Info
Approved Symbol SLC22A16
Symbol Alias FLIPT2, CT2, OKB1, OAT6
Approved Name solute carrier family 22 (organic cation/carnitine transporter), member 16
Previous Name solute carrier family 22 (organic cation transporter), member 16
Location 6q21
Position chr6:110424687-110476641, -1
External Links HGNC: 20302
Entrez Gene: 85413
Ensembl: ENSG00000004809
UCSC: uc003puf.4
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Fan, J., 2010 SNP: rs17071713, rs17071722, rs2428190, rs3823447, rs6938431, rs7768422, rs9400393 For gene-based test, P-value = 0.0013 in STEP1; P-value = 0.034 in NIMH; P-value = 0.00048 in STEP1 and NIMH; P-value = 0.03 in STEP2. nominally significant in all three samples Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 16)

GO terms by PBA (count: 4)

GO terms by database search (count: 12)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 16)

Literature-origin SNPs (count: 7)

LD-proxies (count: 9)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 5)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr6:110424687..110476641 View in gBrowse
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