Gene Report

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Basic Info

Approved Symbol	CSMD3
Approved Name	CUB and Sushi multiple domains 3
Location	8q23.3
Position	chr8:112222928-113437099, -1
External Links	HGNC: 19291 Entrez Gene: 114788 Ensembl: ENSG00000164796 UCSC: uc003ynu.3
No. of Studies	1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ?	NO
Overlap with MDD?	NO

Gene related studies (count: 1)

Reference	Tested Markers	Statistical Values/Author Comments	Result Category	Comment on Study
Xu, W., 2014	SNP: rs1459005	The SNP within or near this gene did not achieve genome-wide significance.	Negative	Comment on Study

Gene functional annotation

Gene related GO terms (count: 2)

ID	Name	Type	Evidence[PMID]	No. of Genes in BDgene
GO:0005886	plasma membrane	cellular component	IEA	360
GO:0016021	integral component of membrane	cellular component	IEA	219

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors

Gene related SNPs (count: 10)

rs_ID	Location	Functional Annotation	No. of Studies (Positive/Negative/Trend)
rs1459005	chr8:112902910 - 112902910(1)	intron_variant	1(0/1/0)

rs_ID	Location	Functional Annotation
rs6982356	chr8:112865462 - 112865462(1)	intron_variant
rs10505195	chr8:112897162 - 112897162(1)	intron_variant
rs231327	chr8:112861739 - 112861739(1)	intron_variant
rs231299	chr8:112860095 - 112860095(1)	intron_variant
rs231325	chr8:112862998 - 112862998(1)	intron_variant
rs231326	chr8:112862477 - 112862477(1)	intron_variant
rs231311	chr8:112849858 - 112849858(1)	intron_variant
rs231303	chr8:112857433 - 112857433(1)	intron_variant
rs231307	chr8:112853741 - 112853741(1)	intron_variant

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (Positive/Negative/Trend)
Chr 8	chr8:0-145138636	3 (0/3/0)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)

Gene relationship with SZ

Gene relationship with MDD

View in gBrowse

Region: chr8:112222928..113437099 View in gBrowse