Gene Report

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Basic Info

Approved Symbol	CFAP69
Previous Symbol	C7orf63
Symbol Alias	FLJ21062, FAP69
Approved Name	cilia and flagella associated protein 69
Previous Name	chromosome 7 open reading frame 63
Name Alias	hypothetical protein FLJ21062, "flagellar protein 69 homolog (Chlamydomonas)"
Location	7q21.13
Position	chr7:90245174-90311063, 1
External Links	HGNC: 26107 Entrez Gene: 79846 Ensembl: ENSG00000105792 UCSC: uc010lep.3
No. of Studies	1 (Positive: 0; Negative: 0; trend: 1)
Overlap with SZ?	NO
Overlap with MDD?	NO

Gene related studies (count: 1)

Reference	Tested Markers	Statistical Values/Author Comments	Result Category	Comment on Study
Georgi, B., 2014	SNP: rs1134956	Putative damaging exonic variant was found within this gene.	Trend	Comment on Study

Gene functional annotation

Gene related GO terms (count: 0)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors

Gene related SNPs (count: 1)

rs_ID	Location	Functional Annotation	No. of Studies (Positive/Negative/Trend)
rs1134956	chr7:90309366 - 90309366(1)	downstream_gene_variant; intron_variant; missense_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; splice_region_variant; upstream_gene_variant	1(0/0/1)

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_McQuillin[2011]_14	chr7:88226688-89777622 (NCBI Build 36 (hg18))	1550935

Gene related other variants (count: 0)

Gene related regions (count: 4)

Region Name	Position	No. of Studies (Positive/Negative/Trend)
7q21	chr7:77900000-98400000	4 (0/2/2)
7q21-31	chr7:77900000-127500000	1 (1/0/0)
Chr 7	chr7:0-159345973	3 (0/3/0)
7p15-q21	chr7:20900000-98400000	1 (0/1/0)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)

Gene relationship with SZ

Gene relationship with MDD

View in gBrowse

Region: chr7:90245174..90311063 View in gBrowse