BDgene

SNP Report

Basic Info
Name rs7461611 dbSNP Ensembl
Location chr8:132036372 - 132036372(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.267772
Functional Annotation intron_variant; splice_region_variant; synonymous_variant.
Consequence to Transcript intron_variant(ENST00000254627); splice_region_variant(ENST00000262283); synonymous_variant(ENST00000262283)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Xu, W., 2014 A/G P-value=5.9E-05 P-value=5.9E-05 Top 132 SNPs (showing suggestive association to BD in our CA...... Top 132 SNPs (showing suggestive association to BD in our CAMH family cohort: p<0.0001). More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
OC90 otoconin 90 8q24.22 1(0/1/0)

SNPs in LD with rs7461611 (count: 12) View in gBrowse (chr8:132026910..132041071 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 12)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)