BDgene

SNP Report

Basic Info
Name rs7179067 dbSNP Ensembl
Location chr15:87799455 - 87799455(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.32528
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Athanasiu, L.,2011 A/G Allelic association: OR=0.9886, P-value = 9.34E-01, P-value(...... Allelic association: OR=0.9886, P-value = 9.34E-01, P-value(trend)=9.35E-01 More... No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NTRK3 neurotrophic tyrosine kinase, receptor, type 3 15q24-q25 2(2/0/0)

SNPs in LD with rs7179067 (count: 6) View in gBrowse (chr15:87781849..87799455 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 6)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016