SNP Report

Basic Info
Name rs6849474 dbSNP Ensembl
Location chr4:55452295 - 55452295(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.355831
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; intron_variant; missense_variant; NMD_transcript_variant; upstream_gene_variant.
Polyphen Annotation: unknown(ENST00000608091)
Consequence to Transcript 3_prime_UTR_variant(ENST00000506103); downstream_gene_variant(ENST00000506747); intron_variant(ENST00000309964, ENST00000381322, ENST00000513440); missense_variant(ENST00000608091); NMD_transcript_variant(ENST00000506103); upstream_gene_variant(ENST00000511124)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
TMEM165 transmembrane protein 165 4q12 Mapped by Literature SNP
CLOCK clock circadian regulator 4q12 12(5/7/0)

SNPs in LD with rs6849474 (count: 0) View in gBrowse (chr4:55452295..55452295 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)