BDgene

SNP Report

Basic Info
Name rs6732834 dbSNP Ensembl
Location chr2:85278479 - 85278479(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.076877
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000282111, ENST00000442813)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Ollila, H. M.,2009 C/T FBAT: P-value = 0.806607 FBAT: P-value = 0.806607 No significant association was observed No significant association was observed Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) 2p11.2 1(0/1/0)

SNPs in LD with rs6732834 (count: 0) View in gBrowse (chr2:85278479..85278479 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016