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SNP Report
Name | rs6693503 dbSNP Ensembl | ||
---|---|---|---|
Location | chr1:19660801 - 19660801(1) | ||
Variant Alleles | A/G | ||
Ancestral Allele | A | ||
Minor Allele | G | ||
Minor Allele Frequence | 0.437899 | ||
Functional Annotation | downstream_gene_variant; upstream_gene_variant. | ||
Consequence to Transcript | downstream_gene_variant(ENST00000289749, ENST00000375136, ENST00000425400, ENST00000427894, ENST00000428975, ENST00000439664, ENST00000451758, ENST00000548815, ENST00000602293, ENST00000602384, ENST00000602450, ENST00000602662, ENST00000615215, ENST00000618761, ENST00000621723, ENST00000622566); upstream_gene_variant(ENST00000289753) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | NO | ||
Overlap with MDD? | YES |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Fukuo, Y.,2010 | Association analysis:genotype P-value = 0.977, allele P-value = 0.904 | No significant association was observed. | Negative |