BDgene

SNP Report

Basic Info
Name rs592807 dbSNP Ensembl
Location chrX:123457805 - 123457805(1)
Variant Alleles C/T
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.189404
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000541091, ENST00000620443, ENST00000620581, ENST00000622768)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Shi, J., 2008 (b) A/G G Allelic association of neurotransmission systems genes with ...... Allelic association of neurotransmission systems genes with bipolar disorder: TDT P-value = 0.0267, Gene-wide P-value = 0.4036 (P values were based on permutation for all SNPs in each gene). More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GRIA3 glutamate receptor, ionotropic, AMPA 3 Xq25 1(0/1/0)

SNPs in LD with rs592807 (count: 0) View in gBrowse (chrX:123457805..123457805 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)