BDgene

SNP Report

Basic Info
Name rs5925155 dbSNP Ensembl
Location chrX:152289446 - 152289446(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.287947
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000370314, ENST00000535043)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Shi, J., 2008 (b) A/G G Allelic association of neurotransmission systems genes with ...... Allelic association of neurotransmission systems genes with bipolar disorder: TDT P-value = 0.0359, Gene-wide P-value = 0.2428 (P values were based on permutation for all SNPs in each gene). More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3 Xq28 3(1/2/0)

SNPs in LD with rs5925155 (count: 0) View in gBrowse (chrX:152289446..152289446 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)