SNP Report

Basic Info
Name rs4815603 dbSNP Ensembl
Location chr20:3791880 - 3791880(1)
Variant Alleles A/T
Ancestral Allele T
Minor Allele A
Minor Allele Frequence 0.294129
Functional Annotation intron_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000344256, ENST00000379598); upstream_gene_variant(ENST00000245960, ENST00000340833, ENST00000439880, ENST00000467519)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Jiang, Y.,2011 Non-weighted test under H0: P-value(additive)=0.0000751, P-v...... Non-weighted test under H0: P-value(additive)=0.0000751, P-value(dominant)=0.000003, P-value(recessive)=0.205; weighted test under H'0: P-value(additive)=0.000933, P-value(dominant)=0.0000142, P-value(recessive)=0.0639; logistic regression: P-value(additive)=0.0000182, P-value(dominant)=0.00000048, P-value(recessive)=0.169 More... Significant associations were found . Significant associations were found . Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CDC25B cell division cycle 25B 20p13 1(0/1/0)

SNPs in LD with rs4815603 (count: 0) View in gBrowse (chr20:3791880..3791880 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)