SNP Report

Basic Info

Name	rs4583255 dbSNP Ensembl
Location	chr16:29977620 - 29977620(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.348842
Functional Annotation	downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000279396, ENST00000414689, ENST00000566848, ENST00000569481, ENST00000570255); intron_variant(ENST00000279394, ENST00000308893, ENST00000543033); upstream_gene_variant(ENST00000416441)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Steinberg, S.,2012		T	Association results in bipolar disorder follow-up samples(7,...... Association results in bipolar disorder follow-up samples(7,333 cases; 43,779 controls):OR(95% CI) = 1.08 (1.03, 1.12),P-value = 0.00026 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TAOK2	TAO kinase 2	16p11.2	1(0/1/0)
TMEM219	transmembrane protein 219	16p11.2	Mapped by Literature SNP

SNPs in LD with rs4583255 (count: 0) View in gBrowse (chr16:29977620..29977620 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Steinberg, S.,2012	Association results in schizophrenia follow-up samples(10,671 cases; 23,900 controls):OR(95% CI) = 1.06 (1.02, 1.10),P-value = 0.0011	No significant association was observed.	Negative

Overlap with MDD from cross-disorder studies (count: 0)