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SNP Report
Basic Info
| Name | rs3011267 dbSNP Ensembl |
|---|---|
| Location | chr9:133005806 - 133005806(1) |
| Variant Alleles | A/G |
| Ancestral Allele | G |
| Minor Allele | A |
| Minor Allele Frequence | 0.21266 |
| No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) |
| Source | Literature |
| Overlap with SZ? | YES |
| Overlap with MDD? | NO |
SNP related studies (count: 1)
SNP related genes (count: 2)
| Approved Symbol | Approved Name | Location | No. of Studies (Positive/Negative/Trend)  |
|---|---|---|---|
| GTF3C5 | general transcription factor IIIC, polypeptide 5, 63kDa | 9q34.13 | 1(0/1/0) |
| GFI1B | growth factor independent 1B transcription repressor | 9q34.13 | 1(0/1/0) |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 1)
Overlap with SZ from cross-disorder studies (count: 1)
| Reference | Statistical Result | Description | Result Category |
|---|---|---|---|
| Bergen, S. E.,2012 | logistic regression:P-value > E-05 | No significant association was observed in SZ. | Negative |
Overlap with MDD from cross-disorder studies (count: 0)