SNP Report

Basic Info

Name	rs3008049 dbSNP Ensembl
Location	chr6:165650129 - 165650129(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.210663
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000366882, ENST00000539869, ENST00000580695); non_coding_transcript_variant(ENST00000580695)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
McDonald, M. L.,2012			chi square test:OR(95%CI) = 1.2(1.1â€“1.4),P-value = 0.0011 ...... chi square test:OR(95%CI) = 1.2(1.1â€“1.4),P-value = 0.0011 for BD-I More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PDE10A	phosphodiesterase 10A	6q26	1(0/1/0)

SNPs in LD with rs3008049 (count: 0) View in gBrowse (chr6:165650129..165650129 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)