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SNP Report
Name | rs2282586 dbSNP Ensembl | ||
---|---|---|---|
Location | chr11:120987701 - 120987701(1) | ||
Variant Alleles | G/A | ||
Ancestral Allele | G | ||
Minor Allele | A | ||
Minor Allele Frequence | 0.324081 | ||
Functional Annotation | 3_prime_UTR_variant; downstream_gene_variant. | ||
Consequence to Transcript | 3_prime_UTR_variant(ENST00000527524); downstream_gene_variant(ENST00000438375) | ||
No. of Studies | 2 (Positive: 1; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | YES | ||
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Pickard, B. S., 2006 | P-value = 0.358 between SCZ cases and controls; P-value = 0.058 between all cases and controls | Negative |