SNP Report

Basic Info

Name	rs2267712 dbSNP Ensembl
Location	chr7:30672618 - 30672618(1)
Variant Alleles	A/C
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.220647
Functional Annotation	intron_variant; NMD_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000341843, ENST00000348438, ENST00000452278, ENST00000471646, ENST00000506074); NMD_transcript_variant(ENST00000452278)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Ceulemans, S.,2011	A/C		Single SNP analyses: Permuted P-value = 0.1676, Odds Ratio=0...... Single SNP analyses: Permuted P-value = 0.1676, Odds Ratio=0.7798 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CRHR2	corticotropin releasing hormone receptor 2	7p14.3	3(2/1/0)

SNPs in LD with rs2267712 (count: 5) View in gBrowse (chr7:30672618..30679433 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²<=0.8.

rs_ID	Functional Annotation	r²[population]
rs2284220	downstream_gene_variant; intron_variant; NMD_transcript_variant	1.0[CEU]
rs1003929	downstream_gene_variant; intron_variant; NMD_transcript_variant	1.0[CEU]; 0.879[TSI]
rs6462219	intron_variant; NMD_transcript_variant	1.0[CEU]
rs2267717	downstream_gene_variant; intron_variant; NMD_transcript_variant	0.827[CEU]
rs6965973	downstream_gene_variant; intron_variant; NMD_transcript_variant	1.0[CEU]; 0.957[TSI]

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)