SNP Report

Basic Info

Name	rs1927252 dbSNP Ensembl
Location	chr1:198264777 - 198264777(1)
Variant Alleles	C/A
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.465855
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000391974); intron_variant(ENST00000367385, ENST00000538004)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Smith, E. N.,2011	A/C		Genome-Wide Association: OR=1.35, P-value = 3.6E-07 Genome-Wide Association: OR=1.35, P-value = 3.6E-07	Suggestive association was found. Suggestive association was found.	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
NEK7	NIMA-related kinase 7	1q31.3	2(0/1/1)

SNPs in LD with rs1927252 (count: 0) View in gBrowse (chr1:198264777..198264777 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)