SNP Report

Basic Info
Name rs1893050 dbSNP Ensembl
Location chr11:84917050 - 84917050(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.0165735
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000376104, ENST00000398309, ENST00000524982, ENST00000527088, ENST00000529111, ENST00000530589, ENST00000532653); non_coding_transcript_variant(ENST00000529111, ENST00000530589)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Xu, W., 2014 C/T P-value=5.31E-05 P-value=5.31E-05 Top 132 SNPs (showing suggestive association to BD in our CA...... Top 132 SNPs (showing suggestive association to BD in our CAMH family cohort: p<0.0001). More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DLG2 discs, large homolog 2 (Drosophila) 11q21 3(1/1/1)

SNPs in LD with rs1893050 (count: 0) View in gBrowse (chr11:84917050..84917050 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)