SNP Report

Basic Info
Name rs169068 dbSNP Ensembl
Location chr16:1079872 - 1079872(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.481829
Functional Annotation missense_variant; upstream_gene_variant.
Polyphen Annotation: benign(ENST00000293897)
SIFT Annotation: tolerated(ENST00000293897)
Consequence to Transcript missense_variant(ENST00000293897); upstream_gene_variant(ENST00000566499, ENST00000569832, ENST00000624643)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Yosifova, A.,2009 C/T Allelic association: P-value = 0.15 Allelic association: P-value = 0.15 No significant association was observed No significant association was observed Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SSTR5 somatostatin receptor 5 16p13.3 2(1/1/0)
SSTR5-AS1 SSTR5 antisense RNA 1 16p13.3 Mapped by Literature SNP

SNPs in LD with rs169068 (count: 0) View in gBrowse (chr16:1079872..1079872 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)