BDgene

SNP Report

Basic Info
Name rs162724 dbSNP Ensembl
Location chr3:7727595 - 7727595(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.239816
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000357716, ENST00000486284)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Shi, J., 2008 (b) A/G G Allelic association of neurotransmission systems genes with ...... Allelic association of neurotransmission systems genes with bipolar disorder: TDT P-value = 0.0205, Gene-wide P-value = 0.3037 (P values were based on permutation for all SNPs in each gene). More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GRM7 glutamate receptor, metabotropic 7 3p26-p25 3(2/1/0)

SNPs in LD with rs162724 (count: 0) View in gBrowse (chr3:7727595..7727595 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016