SNP Report

Basic Info

Name	rs149826123 dbSNP Ensembl
Location	chr17:3292483 - 3292483(1)
Variant Alleles	A/G/T
Minor Allele	T
Minor Allele Frequence	0.00179712
Functional Annotation	intron_variant; missense_variant; non_coding_transcript_variant. Polyphen Annotation: possibly damaging(ENST00000323404' target='_blank'>ENST00000323404, ENST00000615105' target='_blank'>ENST00000615105); benign(ENST00000323404' target='_blank'>ENST00000323404, ENST00000615105' target='_blank'>ENST00000615105) SIFT Annotation: deleterious(ENST00000323404, ENST00000615105)
Consequence to Transcript	intron_variant(ENST00000573491, ENST00000573901, ENST00000576166); missense_variant(ENST00000323404, ENST00000615105, ENST00000323404, ENST00000615105); non_coding_transcript_variant(ENST00000573491, ENST00000573901, ENST00000576166)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Georgi, B., 2014	A/T		7 in BPI, 6 in Well 7 in BPI, 6 in Well	Top 30 Amish-specific putative damaging exonic missense vari...... Top 30 Amish-specific putative damaging exonic missense variants by prevalence in affected individuals. More...	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
OR3A1	olfactory receptor, family 3, subfamily A, member 1	17p13.3	1(0/0/1)

SNPs in LD with rs149826123 (count: 0) View in gBrowse (chr17:3292483..3292483 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)