SNP Report

Basic Info

Name	rs147915749 dbSNP Ensembl
Location	chr6:84215348 - 84215348(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.00119808
Functional Annotation	downstream_gene_variant; missense_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant. Polyphen Annotation: possibly damaging(ENST00000257766, ENST00000403245, ENST00000617909) SIFT Annotation: deleterious(ENST00000257766, ENST00000403245, ENST00000617909)
Consequence to Transcript	downstream_gene_variant(ENST00000435955); missense_variant(ENST00000257766, ENST00000403245, ENST00000617909); non_coding_transcript_exon_variant(ENST00000497936); non_coding_transcript_variant(ENST00000497936)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Georgi, B., 2014	A/G		7 in BPI, 4 in Well 7 in BPI, 4 in Well	Top 30 Amish-specific putative damaging exonic missense vari...... Top 30 Amish-specific putative damaging exonic missense variants by prevalence in affected individuals. More...	Trend

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CEP162	centrosomal protein 162kDa	6q14.3	1(0/0/1)
KIAA1009	centrosomal protein 162kDa	6q14.3	Literature-origin; Mapped by Literature SNP

SNPs in LD with rs147915749 (count: 0) View in gBrowse (chr6:84215348..84215348 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)