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SNP Report
Name | rs13380006 dbSNP Ensembl | ||
---|---|---|---|
Location | chr15:92472898 - 92472898(1) | ||
Variant Alleles | C/T | ||
Ancestral Allele | G | ||
Minor Allele | T | ||
Minor Allele Frequence | 0.41853 | ||
Functional Annotation | downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant. | ||
Consequence to Transcript | downstream_gene_variant(ENST00000268164); intron_variant(ENST00000556865, ENST00000624458); non_coding_transcript_variant(ENST00000556865, ENST00000624458); upstream_gene_variant(ENST00000554440) | ||
No. of Studies | 1 (Positive: 1; Negative: 0; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | YES | ||
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
McAuley, E. Z., 2012 | P-value > 0.075 | Single SNP analysis did not yield significant evidence for association. | Negative |