SNP Report

Basic Info

Name	rs1274270 dbSNP Ensembl
Location	chr3:114610562 - 114610562(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.114217
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000357258, ENST00000393785, ENST00000462705, ENST00000463890, ENST00000464560, ENST00000471418, ENST00000479879, ENST00000480832, ENST00000481632, ENST00000491500, ENST00000492665); non_coding_transcript_variant(ENST00000463890, ENST00000479879, ENST00000480832, ENST00000491500, ENST00000492665)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Xu, W., 2014	T/C		P-value=3.44E-06 P-value=3.44E-06	Top 132 SNPs (showing suggestive association to BD in our CA...... Top 132 SNPs (showing suggestive association to BD in our CAMH family cohort: p<0.0001). More...	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ZBTB20	zinc finger and BTB domain containing 20	3q13.2	1(0/1/0)

SNPs in LD with rs1274270 (count: 0) View in gBrowse (chr3:114610562..114610562 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)