SNP Report

Basic Info
Name rs11632600 dbSNP Ensembl
Location chr15:60581471 - 60581471(1)
Variant Alleles G/T
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.123403
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000261523, ENST00000309157, ENST00000335670, ENST00000449337, ENST00000551975, ENST00000557822, ENST00000558234, ENST00000558235, ENST00000559343, ENST00000559824, ENST00000560004); NMD_transcript_variant(ENST00000551975); non_coding_transcript_variant(ENST00000557822, ENST00000558234, ENST00000558235, ENST00000559824, ENST00000560004)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Lai, Y. C., 2015 Empirical P-value=0.01, OR=1.9 Empirical P-value=0.01, OR=1.9 One of 45 SNPs showed associations with BD. One of 45 SNPs showed associations with BD. Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RORA RAR-related orphan receptor A 15q21-q22 3(2/1/0)

SNPs in LD with rs11632600 (count: 0) View in gBrowse (chr15:60581471..60581471 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)