SNP Report

Basic Info

Name	rs11536891 dbSNP Ensembl
Location	chr9:117717059 - 117717059(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.142572
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000355622, ENST00000394487, ENST00000472304)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Oliveira, J., 2013	T/C		rs11536891 TT vs. CT+CC: 71% vs. 61%, P-value=0.008, pc=0.02...... rs11536891 TT vs. CT+CC: 71% vs. 61%, P-value=0.008, pc=0.02; OR=1.57, CI95%=1.11-2.22 More...	The analysis of TLR-4 genotype distribution revealed that th...... The analysis of TLR-4 genotype distribution revealed that the TLR-4 rs11536891 T alleles was significantly more prevalent in BD patients than in HC. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TLR4	toll-like receptor 4	9q33.1	1(1/0/0)

SNPs in LD with rs11536891 (count: 0) View in gBrowse (chr9:117717059..117717059 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)