SNP Report

Basic Info

Name	rs1126442 dbSNP Ensembl
Location	chr9:137156924 - 137156924(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.139577
Functional Annotation	missense_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; synonymous_variant; upstream_gene_variant. Polyphen Annotation: unknown(ENST00000350902)
Consequence to Transcript	missense_variant(ENST00000350902); NMD_transcript_variant(ENST00000350902); non_coding_transcript_exon_variant(ENST00000471122); non_coding_transcript_variant(ENST00000471122); synonymous_variant(ENST00000371546, ENST00000371550, ENST00000371553, ENST00000371555, ENST00000371559, ENST00000371560, ENST00000371561); upstream_gene_variant(ENST00000485413)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Yosifova, A.,2009	G/A		Allelic association: P-value = 0.28 Allelic association: P-value = 0.28	No significant association was observed No significant association was observed	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GRIN1	glutamate receptor, ionotropic, N-methyl D-aspartate 1	9q34.3	3(2/1/0)

SNPs in LD with rs1126442 (count: 0) View in gBrowse (chr9:137156924..137156924 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)