SNP Report

Basic Info
Name rs10128333 dbSNP Ensembl
Location chr10:62810278 - 62810278(1)
Variant Alleles C/T
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.361422
Functional Annotation downstream_gene_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000242480, ENST00000373783, ENST00000411732, ENST00000439032, ENST00000493899, ENST00000637191, LRG_239t1); upstream_gene_variant(ENST00000425290)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Gallitano, A. L.,2012 Association analysis: FBAT, P-value > 0.05 Association analysis: FBAT, P-value > 0.05 No significant association was observed in BD. No significant association was observed in BD. Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
EGR2 early growth response 2 10q21.1 3(1/2/0)
ADO 2-aminoethanethiol (cysteamine) dioxygenase 10q21.3 Mapped by Literature SNP

SNPs in LD with rs10128333 (count: 0) View in gBrowse (chr10:62810278..62810278 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)