Gene Report

Basic Info
Approved Symbol OXCT1
Previous Symbol OXCT
Symbol Alias SCOT
Approved Name 3-oxoacid CoA transferase 1
Previous Name 3-oxoacid CoA transferase
Location 5p13
Position chr5:41730065-41870519, -1
External Links HGNC: 8527
Entrez Gene: 5019
Ensembl: ENSG00000083720
UCSC: uc003jmn.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Jamain, S., 2014 SNP: rs10512793, rs822135, rs625487, rs633407
Haplotype: rs624097 - rs316762 - rs10512793()
Significant association of SNP in this gene with BD was observed. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 19)

GO terms by PBA (count: 1)

GO terms by database search (count: 18)

Gene related KEGG pathways (count: 3)

KEGG pathways by PBA (count: 0)

KEGG pathways by database search (count: 3)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 4)

Literature-origin SNPs (count: 4)

LD-proxies (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr5:41730065..41870519 View in gBrowse
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