Gene Report

Basic Info
Approved Symbol HLA-F-AS1
Approved Name HLA-F antisense RNA 1
Previous Name HLA-F antisense RNA 1 (non-protein coding)
Location 6p22.1
Position chr6:29726601-29749049, -1
External Links HGNC: 26645
Entrez Gene: 285830
Ensembl: ENSG00000214922
UCSC: uc003nnp.2
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? YES
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Saito T., 2014 SNP: rs1736913 The associated SNP in this gene showed significant association with BD. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 0)
Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 42)

Literature-origin SNPs (count: 1)

LD-proxies (count: 41)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 0)

Gene relationship with MDD

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Region: chr6:29726601..29749049 View in gBrowse
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