BDgene

Core Gene from Gene Prioritization Pathways from PBA (Pathway-based Analysis) Enriched Pathways for Core Genes Enriched Pathways for Cross-disorder Genes

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Gene Report

Basic information

Related studies

Functional annotation

Related other genetic factors

Overlap with SZ and MDD

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Basic Info

Approved Symbol	FAR2
Previous Symbol	MLSTD1
Symbol Alias	FLJ10462, SDR10E2
Approved Name	fatty acyl CoA reductase 2
Previous Name	male sterility domain containing 1
Name Alias	short chain dehydrogenase/reductase family 10E, member 2
Location	12p11.23
Position	chr12:29149103-29340980, 1
External Links	HGNC: 25531 Entrez Gene: 55711 Ensembl: ENSG00000064763 UCSC: uc001ris.5
No. of Studies	1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ?	NO
Overlap with MDD?	NO

Gene related studies (count: 1)

Reference	Tested Markers	Statistical Values/Author Comments	Result Category	Comment on Study
Sklar, P., 2008	SNP: rs11049998, rs11050038	No significant association of this gene was observed in BD.	Negative	Comment on Study

Gene functional annotation

Gene related GO terms (count: 12)

GO terms by PBA (count: 1)

GO terms by database search (count: 11)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors

Gene related SNPs (count: 2)

Literature-origin SNPs (count: 2)

rs_ID	Location	Functional Annotation	No. of Studies (Positive/Negative/Trend)
rs11049998	chr12:29041512 - 29041512(1)		1(0/1/0)
rs11050038	chr12:29105394 - 29105394(1)		1(0/1/0)

LD-proxies (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 2)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)

Gene relationship with SZ

Gene relationship with MDD

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Region: chr12:29149103..29340980 View in gBrowse