BDgene

Core Gene from Gene Prioritization Pathways from PBA (Pathway-based Analysis) Enriched Pathways for Core Genes Enriched Pathways for Cross-disorder Genes

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Other Variant Report

Basic Info

Name	CHRFAM7A 2bp deletion
Type	insertion/deletion
Length of Repeat Unit	2bp
Related Gene	CHRFAM7A
No. of Study	1 (Positive: 0; Negative 1; Trend: 0)
Overlap with SZ?	YES
Overlap with MDD?	NO

Variant related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Flomen, R. H., 2006			X²=2.52, 2 df, P-value = 0.3 for bipolar versus controls, X²=1.12, 2 df, P-value = 0.6 for psychosis versus controls, 2bp deletion comparisons (33 vs.13/23 vs.11/12/22)	We found no evidence for association of the 2bp deletion alo..... More We found no evidence for association of the 2bp deletion alone with any of the three phenotypes. Less	Negative

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Flomen, R. H., 2006	P-value = 0.9, X²=0.19, 2 df for schizophrenia versus controls, 2bp deletion comparisons (33 vs. 13/23 vs. 11/12/22)	We found no evidence for association of the 2bp deletion alone with any of the three phenotypes	Negative

Overlap with MDD from cross-disorder studies (count: 0)