SNP Report

Basic Info

Name	rs9879090 dbSNP Ensembl
Location	chr3:52614249 - 52614249(1)
Variant Alleles	T/C
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.427915
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000296302, ENST00000337303, ENST00000356770, ENST00000394830, ENST00000409057, ENST00000409114, ENST00000409767, ENST00000410007, ENST00000412587, ENST00000423351, ENST00000446103, ENST00000480064); NMD_transcript_variant(ENST00000412587); non_coding_transcript_variant(ENST00000480064); upstream_gene_variant(ENST00000462207)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PBRM1	polybromo 1	3p21	5(4/0/1)

SNPs in LD with rs9879090 (count: 0) View in gBrowse (chr3:52614249..52614249 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)