BDgene

SNP Report

Basic Info
Name rs9799378 dbSNP Ensembl
Location chr4:8587987 - 8587987(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.254593
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000382487, ENST00000504255, ENST00000509216); intron_variant(ENST00000514302); NMD_transcript_variant(ENST00000514302); upstream_gene_variant(ENST00000315782, ENST00000360986, ENST00000382480, ENST00000504070, ENST00000506287, ENST00000514602, ENST00000514875, ENST00000515606)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CPZ carboxypeptidase Z 4p16.1 Mapped by Literature SNP
GPR78 G protein-coupled receptor 78 4p16.1 2(2/0/0)

SNPs in LD with rs9799378 (count: 0) View in gBrowse (chr4:8587987..8587987 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)