SNP Report

Basic Info

Name	rs9530460 dbSNP Ensembl
Location	chr13:75684934 - 75684934(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.301518
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000424489); intron_variant(ENST00000341547, ENST00000357063, ENST00000377499, ENST00000377534, ENST00000533305, ENST00000563635); non_coding_transcript_variant(ENST00000533305, ENST00000563635)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Jiang, Y.,2011			Non-weighted test under H0: P-value(additive)=0.00186, P-val...... Non-weighted test under H0: P-value(additive)=0.00186, P-value(dominant)=0.412, P-value(recessive)=0.000014; weighted test under H'0: P-value(additive)=0.000458, P-value(dominant)=0.287, P-value(recessive)=0.00000216; logistic regression: P-value(additive)=0.000788, P-value(dominant)=0.294, P-value(recessive)=0.00000702 More...	Suggestive association was found. Suggestive association was found.	Trend

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
LMO7	LIM domain 7	13q22.2	Mapped by Literature SNP
FAM204CP	family with sequence similarity 204, member C, pseudogene	13q22.2	Mapped by Literature SNP

SNPs in LD with rs9530460 (count: 0) View in gBrowse (chr13:75684934..75684934 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)