BDgene

SNP Report

Basic Info
Name rs9517575 dbSNP Ensembl
Location chr13:99057486 - 99057486(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.304712
Functional Annotation intron_variant; NMD_transcript_variant.
Consequence to Transcript intron_variant(ENST00000427887, ENST00000479769); NMD_transcript_variant(ENST00000479769)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Detera-Wadleigh, S. D., 2007 FBAT-e P-value = 0.0078 in NIMH1-2, FBAT-e P-value = 0.0896 ...... FBAT-e P-value = 0.0078 in NIMH1-2, FBAT-e P-value = 0.0896 in NIMH3, FBAT-e P-value = 0.1673 in NIMH4; FBAT-e P-value = 0.0412 (0.0156) in CHIP-CNG sample More... detected evidence of association at the P<0.05 level in the ...... detected evidence of association at the P<0.05 level in the NIMH1-2 and in CHIP-CNG More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DOCK9 dedicator of cytokinesis 9 13q32.3 1(1/0/0)

SNPs in LD with rs9517575 (count: 0) View in gBrowse (chr13:99057486..99057486 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)