SNP Report

Basic Info

Name	rs939024 dbSNP Ensembl
Location	chr8:133574470 - 133574470(1)
Variant Alleles	A/G
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.233626
Functional Annotation	downstream_gene_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000561761); upstream_gene_variant(ENST00000399640, ENST00000517668, ENST00000518298, ENST00000519435, ENST00000521180, ENST00000522285, ENST00000522652, ENST00000522873)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Zandi, P. P., 2007	A/G		FBAT P-value = 0.005, GIST P-value > 0.05 in the initial sam...... FBAT P-value = 0.005, GIST P-value > 0.05 in the initial sample; FBAT P-value = 0.517, GIST P-value > 0.05 in the replication sample More...	It is nominally (P<0.05) significant in the single SNP analy...... It is nominally (P<0.05) significant in the single SNP analysis by FBAT and HBAT, More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ST3GAL1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	8q24.22	4(3/0/1)

SNPs in LD with rs939024 (count: 0) View in gBrowse (chr8:133574470..133574470 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)