BDgene

SNP Report

Basic Info
Name rs9372716 dbSNP Ensembl
Location chr6:122771214 - 122771214(1)
Variant Alleles C/T
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.252596
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Iwayama, Y., 2010 T/C T P-value for allele test is 0.0474, p-value for genotype test...... P-value for allele test is 0.0474, p-value for genotype test is 0.0236, p-value is 0.55 after correction by permutation test. More... showed nominal associations (P<0.05). However, after correct...... showed nominal associations (P<0.05). However, after correction by permutation tests, none remained significant. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FABP7 fatty acid binding protein 7, brain 6q22-q23 1(1/0/0)

SNPs in LD with rs9372716 (count: 4) View in gBrowse (chr6:122761511..122771214 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 4)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016