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SNP Report
Name | rs900144 dbSNP Ensembl | ||
---|---|---|---|
Location | chr11:13272721 - 13272721(1) | ||
Variant Alleles | C/T | ||
Ancestral Allele | C | ||
Minor Allele | T | ||
Minor Allele Frequence | 0.327077 | ||
Functional Annotation | upstream_gene_variant. | ||
Consequence to Transcript | upstream_gene_variant(ENST00000527998, ENST00000529050, ENST00000534544) | ||
No. of Studies | 1 (Positive: 0; Negative: 1; Trend: 0) | ||
Source | Literature | ||
Overlap with SZ? | NO | ||
Overlap with MDD? | YES |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Soria, V.,2010 | X2-tests:allele P-value = 0.181, Model Dominant, genotype P-value = 0.023, OR(95%CI)=0.69 (0.50-0.95) | Significant association was found. | Positive |