SNP Report

Basic Info

Name	rs891668 dbSNP Ensembl
Location	chrCHR_HSCHR3_2_CTG3:197406482 - 197406482(-1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.291933
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000476764); intron_variant(ENST00000358186, ENST00000392378, ENST00000392379, ENST00000431056, ENST00000432819, ENST00000441275, ENST00000445160, ENST00000446746, ENST00000468710, ENST00000492681); non_coding_transcript_variant(ENST00000468710, ENST00000492681)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Schosser, A.,2011			chi-square (X²) test: genotype, X²=1.8...... chi-square (X²) test: genotype, X²=1.875, P-value = 0.392; allele, X²=1.57, P-value = 0.209 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
BDH1	3-hydroxybutyrate dehydrogenase, type 1	3q29	2(1/1/0)

SNPs in LD with rs891668 (count: 0) View in gBrowse (chrCHR_HSCHR3_2_CTG3:197406482..197406482 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)