SNP Report

Basic Info

Name	rs885834 dbSNP Ensembl
Location	chr10:49607466 - 49607466(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.368211
Functional Annotation	upstream_gene_variant.
Consequence to Transcript	upstream_gene_variant(ENST00000339797, ENST00000374115)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Shi, J., 2007	A/G		TDT P-value = 0.89 of Allelic Association With Bipolar Disor...... TDT P-value = 0.89 of Allelic Association With Bipolar Disorder in the Combined Sample More...		Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CHAT	choline O-acetyltransferase	10q11.2	1(0/1/0)
SLC18A3	solute carrier family 18 (vesicular acetylcholine transporter), member 3	10q11.2	Mapped by Literature SNP

SNPs in LD with rs885834 (count: 0) View in gBrowse (chr10:49607466..49607466 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)