BDgene

SNP Report

Basic Info
Name rs816363 dbSNP Ensembl
Location chr12:117222662 - 117222662(1)
Variant Alleles C/G
Ancestral Allele G
Minor Allele C
Minor Allele Frequence 0.456669
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000317775, ENST00000338101, ENST00000344089, ENST00000618760)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Yosifova, A.,2009 C/G Allelic association: P-value = 0.78 Allelic association: P-value = 0.78 No significant association was observed No significant association was observed Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NOS1 nitric oxide synthase 1 (neuronal) 12q24.22 8(2/5/1)

SNPs in LD with rs816363 (count: 5) View in gBrowse (chr12:117222662..117258729 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 5)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)