SNP Report

Basic Info

Name	rs8099939 dbSNP Ensembl
Location	chr19:42016956 - 42016956(1)
Variant Alleles	T/G
Ancestral Allele	T
Minor Allele	G
Minor Allele Frequence	0.327476
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000594528); intron_variant(ENST00000262895, ENST00000301218, ENST00000454993, ENST00000593562); non_coding_transcript_variant(ENST00000454993)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Yosifova, A.,2011	G>T		GWAS P-value = 0.00000146, OR(95%CI)=2.53(1.65-3.88); Replic...... GWAS P-value = 0.00000146, OR(95%CI)=2.53(1.65-3.88); Replication P-value = 0.097, OR(95%CI)=1.45(0.90-2.34); Mantel-Haenszel P-value = 0.00000212, OR(95%CI)=1.95(1.43-2.67) More...	Suggestive association was found. Suggestive association was found.	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GRIK5	glutamate receptor, ionotropic, kainate 5	19q13.2	2(1/0/1)

SNPs in LD with rs8099939 (count: 0) View in gBrowse (chr19:42016956..42016956 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)